Miyakogusa Predicted Gene

Lj3g3v1341620.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S2F0_LOTJA 360 81.7 81.7 (tr|I3S2F0) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G51070.1 179 52.5 66.1 | Symbols: bHLH115 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:18928018-18929513 FORWARD LENGTH=226
Medicago Medtr2g089000.1 233 51.4 62.1 | BHLH domain class transcription factor | HC | chr2:37541705-37539428 | 20130731
Soybean Glyma13g38140.1 263 61.0 67.5  
LJGI gnl|LJGI|TC58249 1318 100.0 100.0 similar to UniRef100_A7P102 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (60%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1341620.1 length: 230 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 4e-11 80-147
HMMPfam PF00010 HLH 2e-08 78-124
HMMSmart SM00353 helix 1.1e-08 79-130
ProfileScan PS50888 BHLH 12.652 73-124
superfamily SSF47459 HLH, 2.8e-14 63-142
no_ID  
Coil coil coiled-coil NA 114-170
HMMPanther PTHR23042 CIRCADIAN 3.9e-40 77-162
HMMPanther PTHR23042:SF25 NAI1, 3.9e-40 77-162
Seg seg seg NA 25-40
153-175
Wolf-PSORT
Lj3g3v1341620.1	nucl 9, cysk 2, chlo 1, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1341620.1