Miyakogusa Predicted Gene
- Lj3g3v1341610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IKM2_MEDTR |
211 |
79.8 |
90.8 |
(tr|G7IKM2) Blue copper protein OS=Medicago truncatula GN=MTR_2g088990 PE=4 SV=1 |
| TAIR_pep |
AT2G32300.1 |
138 |
49.6 |
76.0 |
| Symbols: UCC1 | uclacyanin 1 | chr2:13722510-13723464 FORWARD LENGTH=261 |
| Medicago |
Medtr2g088990.1 |
211 |
79.8 |
90.8 |
| plastocyanin-like domain protein | HC | chr2:37537716-37538597 | 20130731 |
| Soybean |
Glyma13g38150.1 |
204 |
76.5 |
89.1 |
|
| LJGI |
gnl|LJGI|AV407087 |
674 |
100.0 |
100.0 |
weakly similar to UniRef100_A7PXK7 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (44%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1341610.1 |
length: 147 aa. |
| IPR003245 |
Plastocyanin-like |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005507 |
copper ion binding |
|
|
| Molecular Function |
GO:0009055 |
electron carrier activity |
|
|
| BlastProDom |
PD003122 |
Q8S136_ORYSA_Q8S136; |
1e-18 |
57-119 |
| HMMPfam |
PF02298 |
Cu_bind_like |
9.3e-28 |
38-114 |
| ProfileScan |
PS51485 |
PHYTOCYANIN |
40.436 |
23-122 |
| IPR008972 |
Cupredoxin |
| Gene3D |
G3DSA:2.60.40.420 |
no description |
3e-34 |
22-125 |
| superfamily |
SSF49503 |
Cupredoxins |
9.1e-31 |
21-122 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
120-141 |
- Wolf-PSORT
Lj3g3v1341610.1 chlo 5, extr 4, nucl 2, cyto 1, plas 1, vacu 1, cysk_nucl 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1341610.1 |
|