Miyakogusa Predicted Gene
- Lj3g3v1340540.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LU79_SOYBN |
346 |
75.8 |
80.5 |
(tr|I1LU79) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT3G21870.1 |
226 |
67.4 |
74.3 |
| Symbols: CYCP2;1 | cyclin p2;1 | chr3:7703927-7704813 REVERSE LENGTH=210 |
| Medicago |
Medtr2g088860.1 |
339 |
73.8 |
78.9 |
| cyclin p4 | HC | chr2:37475502-37474092 | 20130731 |
| Soybean |
Glyma12g32200.1 |
346 |
75.8 |
80.5 |
|
| LJGI |
gnl|LJGI|TC65989 |
1372 |
99.9 |
99.9 |
similar to UniRef100_A7PXJ5 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (64%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1340540.1 |
length: 231 aa. |
| IPR012389 |
Cyclin P/U |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPIR |
PIRSF027110 |
Negative |
1.1e-82 |
1-230 |
| IPR013763 |
Cyclin-like |
| superfamily |
SSF47954 |
Cyclin-like |
2.9e-11 |
81-173 |
| IPR013922 |
Cyclin PHO80-like |
| Biological Process |
GO:0000079 |
regulation of cyclin-dependent protein serine/threonine kinase activity |
|
|
| Molecular Function |
GO:0019901 |
protein kinase binding |
|
|
| HMMPfam |
PF08613 |
Cyclin |
7.1e-33 |
36-171 |
| no_ID |
|
| HMMPanther |
PTHR15615 |
UNCHARACTERIZED |
2.8e-62 |
30-191 |
| HMMPanther |
PTHR15615:SF0 |
SUBFAMILY |
2.8e-62 |
30-191 |
| Seg |
seg |
seg |
NA |
156-168 |
- Wolf-PSORT
Lj3g3v1340540.1 cyto 6, pero 2, chlo 1, nucl 1, mito 1, plas 1, E.R. 1, cysk 1, chlo_mito 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1340540.1 |
|