Miyakogusa Predicted Gene

Lj3g3v1324950.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7IU03_MEDTR 1256 77.1 85.5 (tr|G7IU03) Glutamate receptor OS=Medicago truncatula GN=MTR_2g088450 PE=3 SV=1
TAIR_pep AT1G05200.2 1054 66.0 80.5 | Symbols: ATGLR3.4, GLR3.4, GLUR3 | glutamate receptor 3.4 | chr1:1505642-1509002 FORWARD LENGTH=959
Medicago Medtr2g088450.12 1256 77.1 85.5 | glutamate receptor 3.2 | HC | chr2:37288225-37293481 | 20130731
Soybean Glyma12g32030.1 1204 74.3 83.8  
LJGI gnl|LJGI|BP064665 710 99.2 99.2 similar to UniRef100_A7PXG9 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1324950.1 length: 786 aa.
IPR001320 Ionotropic glutamate receptor
method AccNumber shortName E-value location
Molecular Function GO:0004970 ionotropic glutamate receptor activity    
Molecular Function GO:0005234 extracellular-glutamate-gated ion channel activity    
Cellular Component GO:0016020 membrane    
HMMPfam PF00060 Lig_chan 1.6e-29 597-702
HMMSmart SM00079 Eukaryotic 2.1e-19 478-785
IPR001638 Extracellular solute-binding protein, family 3
Molecular Function GO:0005215 transporter activity    
Biological Process GO:0006810 transport    
Cellular Component GO:0030288 outer membrane-bounded periplasmic space    
HMMPfam PF00497 SBP_bac_3 8.8e-13 532-778
IPR001828 Extracellular ligand-binding receptor
HMMPfam PF01094 ANF_receptor 2.7e-72 59-412
IPR002455 GPCR, family 3, gamma-aminobutyric acid receptor, type B
Molecular Function GO:0004965 G-protein coupled GABA receptor activity    
Biological Process GO:0007186 G-protein coupled receptor signaling pathway    
Cellular Component GO:0016021 integral to membrane    
FPrintScan PR01176 GABABRECEPTR 2.4e-07 55-71
115-143
328-340
IPR017103 Ionotropic glutamate receptor, plant
HMMPIR PIRSF037090 Ionotropic 0 1-786
no_ID  
Gene3D G3DSA:1.10.287.70 no description 3.8e-32 595-722
Gene3D G3DSA:3.40.190.10 no description 9.5e-26 456-594
Gene3D G3DSA:3.40.50.2300 no description 1.2e-24 304-399
157-303
HMMPanther PTHR18966 IONOTROPIC 0 3-785
HMMPanther PTHR18966:SF7 GLUTAMATE 0 3-785
Seg seg seg NA 29-41
576-588
659-671
superfamily SSF53822 Periplasmic 1.2e-98 35-471
superfamily SSF53850 Periplasmic 1.2e-32 455-786
Wolf-PSORT
Lj3g3v1324950.1	plas 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1324950.1