Miyakogusa Predicted Gene

Lj3g3v1297300.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1LDL9_SOYBN 288 90.5 94.6 (tr|I1LDL9) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G61490.3 250 73.5 90.5 | Symbols: | Pectin lyase-like superfamily protein | chr3:22758439-22760137 FORWARD LENGTH=476
Medicago Medtr1g100050.1 278 87.8 93.9 | pectin lyase superfamily protein | HC | chr1:45079785-45077811 | 20130731
Soybean Glyma10g37540.1 288 90.5 94.6  
LJGI gnl|LJGI|TC67181 305 98.2 98.2 similar to UniRef100_Q2HUV5 Cluster: Glycoside hydrolase, family 28; n=1; Medicago truncatula|Rep: Glycoside hydrolase, family 28 - Medicago truncatula (Barrel medic), partial (33%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1297300.1 length: 166 aa.
IPR000743 Glycoside hydrolase, family 28
method AccNumber shortName E-value location
Molecular Function GO:0004650 polygalacturonase activity    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00295 Glyco_hydro_28 3.6e-25 30-152
IPR011050 Pectin lyase fold/virulence factor
superfamily SSF51126 Pectin 1.4e-40 31-160
IPR012334 Pectin lyase fold
Gene3D G3DSA:2.160.20.10 no description 1.6e-51 19-158
no_ID  
HMMPanther PTHR31339 FAMILY 6e-72 17-166
HMMPanther PTHR31339:SF0 SUBFAMILY 6e-72 17-166
Wolf-PSORT
Lj3g3v1297300.1	nucl 8.5, cyto_nucl 5.5, chlo 2, mito 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1297300.1