Miyakogusa Predicted Gene

Lj3g3v1296990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6TB16_SOYBN 384 77.0 80.7 (tr|C6TB16) Putative uncharacterized protein OS=Glycine max PE=2 SV=1
TAIR_pep AT5G22000.3 278 75.6 83.9 | Symbols: RHF2A | RING-H2 group F2A | chr5:7277436-7279553 FORWARD LENGTH=375
Medicago Medtr2g087820.1 374 72.8 77.2 | E3 ubiquitin-protein ligase RHF2A-like protein | HC | chr2:36962423-36958700 | 20130731
Soybean Glyma12g31700.3 386 77.4 81.1  
LJGI gnl|LJGI|TC63585 1273 100.0 100.0 similar to UniRef100_Q2HT04 Cluster: Zinc finger, RING-type; n=1; Medicago truncatula|Rep: Zinc finger, RING-type - Medicago truncatula (Barrel medic), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1296990.1 length: 275 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 1.6e-12 36-79
HMMSmart SM00184 Ring 8.1e-06 37-77
ProfileScan PS50089 ZF_RING_2 12.091 37-77
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 8.7e-14 34-88
no_ID  
HMMPanther PTHR22764 RING 1.9e-13 34-108
HMMPanther PTHR22764:SF25 OS04G0579200 1.9e-13 34-108
Seg seg seg NA 143-157
179-190
superfamily SSF57850 RING/U-box 5.4e-16 30-84
Wolf-PSORT
Lj3g3v1296990.1	nucl 8, chlo 4, cysk_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1296990.1