Miyakogusa Predicted Gene

Lj3g3v1296960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IU49_MEDTR 265 55.0 64.5 (tr|G7IU49) DDB1-and CUL4-associated factor OS=Medicago truncatula GN=MTR_2g093200 PE=4 SV=1
TAIR_pep AT3G45620.2 224 49.2 59.8 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr3:16745918-16747993 FORWARD LENGTH=515
Medicago Medtr2g093200.1 265 55.0 64.5 | transducin/WD-like repeat-protein | HC | chr2:39711113-39707415 | 20130731
Soybean Glyma15g04960.1 256 56.6 64.5  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1296960.1 length: 248 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00320 WD40 0.77 1-35
41-89
108-147
187-229
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 2.5e-20 4-245
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
superfamily SSF50978 WD40 7e-17 2-243
no_ID  
HMMPanther PTHR15574 WD 4.1e-90 1-246
HMMPanther PTHR15574:SF19 SUBFAMILY 4.1e-90 1-246
Seg seg seg NA 128-143
Wolf-PSORT
Lj3g3v1296960.1	nucl 6, cyto 3, nucl_plas 3, chlo 2, cyto_pero 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1296960.1