Miyakogusa Predicted Gene

Lj3g3v1295880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IRH1_MEDTR 747 82.0 86.9 (tr|G7IRH1) Ubiquitin carboxyl-terminal hydrolase OS=Medicago truncatula GN=MTR_2g087710 PE=3 SV=1
TAIR_pep AT5G22030.1 536 60.3 74.9 | Symbols: UBP8 | ubiquitin-specific protease 8 | chr5:7290155-7296344 REVERSE LENGTH=913
Medicago Medtr2g087710.1 742 82.0 87.0 | ubiquitin carboxyl-terminal hydrolase | HC | chr2:36896258-36906346 | 20130731
Soybean Glyma12g31660.1 744 82.8 88.0  
LJGI gnl|LJGI|TC64823 337 100.0 100.0 similar to UniRef100_A7PGA8 Cluster: Ubiquitin carboxyl-terminal hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin carboxyl-terminal hydrolase - Vitis vinifera (Grape), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1295880.1 length: 459 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 4.7e-38 328-450
ProfileScan PS50235 UCH_2_3 19.387 34-454
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00973 UCH_2_2 NA 396-413
no_ID  
HMMPanther PTHR24006 FAMILY 1.6e-120 2-453
HMMPanther PTHR24006:SF24 SUBFAMILY 1.6e-120 2-453
superfamily SSF54001 Cysteine 5.8e-54 37-453
Wolf-PSORT
Lj3g3v1295880.1	chlo 5, cyto 3, vacu 3, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1295880.1