Miyakogusa Predicted Gene

Lj3g3v1261190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q2HSH7_MEDTR 636 79.5 87.5 (tr|Q2HSH7) Histone deacetylase OS=Medicago truncatula GN=MTR_2g087270 PE=4 SV=1
TAIR_pep AT1G08460.1 516 64.7 79.1 | Symbols: HDA08, HDA8, ATHDA8 | histone deacetylase 8 | chr1:2672527-2674469 FORWARD LENGTH=377
Medicago Medtr2g087270.1 636 79.5 87.5 | histone deacetylase superfamily protein | HC | chr2:36680260-36677137 | 20130731
Soybean Glyma12g31380.1 614 79.2 86.7  
LJGI gnl|LJGI|BP079770 630 100.0 100.0 similar to UniRef100_Q2HSH7 Cluster: Histone deacetylase superfamily; n=1; Medicago truncatula|Rep: Histone deacetylase superfamily - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1261190.1 length: 385 aa.
IPR000286 Histone deacetylase superfamily
method AccNumber shortName E-value location
FPrintScan PR01270 HDASUPER 5.1e-14 150-173
183-198
272-282
HMMPanther PTHR10625 HISTONE 1.3e-224 33-368
IPR023801 Histone deacetylase domain
Gene3D G3DSA:3.40.800.20 no description 3e-95 10-362
HMMPfam PF00850 Hist_deacetyl 3.2e-79 46-342
no_ID  
HMMPanther PTHR10625:SF18 HISTONE 1.3e-224 33-368
Seg seg seg NA 121-126
231-243
343-353
superfamily SSF52768 Arginase/deacetylase 3.1e-92 14-376
Wolf-PSORT
Lj3g3v1261190.1	cyto 7, cysk 4, mito 1, golg 1, E.R._vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1261190.1