Miyakogusa Predicted Gene
- Lj3g3v1238910.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
I1MQL2_SOYBN |
1300 |
80.0 |
87.4 |
(tr|I1MQL2) Sucrose synthase OS=Glycine max PE=3 SV=2 |
TAIR_pep |
AT1G73370.1 |
1060 |
72.8 |
84.4 |
| Symbols: SUS6, ATSUS6 | sucrose synthase 6 | chr1:27584533-27588326 REVERSE LENGTH=942 |
Medicago |
Medtr6g478030.1 |
1111 |
86.9 |
93.2 |
| sucrose synthase | LC | chr6:28792237-28799904 | 20130731 |
Soybean |
Glyma16g34290.1 |
1274 |
78.9 |
86.3 |
|
LJGI |
gnl|LJGI|GO036318 |
198 |
83.6 |
83.6 |
similar to UniRef100_A7QK05 Cluster: Chromosome undetermined scaffold_109, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_109, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1238910.1 |
length: 775 aa. |
IPR000368 |
Sucrose synthase |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0005985 |
sucrose metabolic process |
|
|
HMMPfam |
PF00862 |
Sucrose_synth |
7.9e-194 |
1-419 |
IPR001296 |
Glycosyl transferase, family 1 |
Biological Process |
GO:0009058 |
biosynthetic process |
|
|
HMMPfam |
PF00534 |
Glycos_transf_1 |
2.6e-31 |
424-596 |
IPR012820 |
Sucrose synthase, plant/cyanobacteria |
Biological Process |
GO:0005985 |
sucrose metabolic process |
|
|
Molecular Function |
GO:0016157 |
sucrose synthase activity |
|
|
HMMPanther |
PTHR12526:SF27 |
SUCROSE |
0 |
1-664 |
HMMTigr |
TIGR02470 |
sucr_synth: |
0 |
1-668 |
no_ID |
|
Gene3D |
G3DSA:3.40.50.2000 |
no description |
7e-19 |
406-613 |
HMMPanther |
PTHR12526 |
GLYCOSYLTRANSFERASE |
0 |
1-664 |
Seg |
seg |
seg |
NA |
179-189 |
superfamily |
SSF53756 |
UDP-Glycosyltransferase/glycogen |
3.9e-49 |
162-630 |
- Wolf-PSORT
Lj3g3v1238910.1 cyto 6, nucl 2, vacu 2, mito 1, plas 1, E.R. 1, golg 1, cysk_nucl 1, golg_plas 1, E.R._plas 1, mito_plas 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v1238910.1 |
|