Miyakogusa Predicted Gene

Lj3g3v1204560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3STN1_LOTJA 476 94.6 94.6 (tr|I3STN1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G22320.1 296 60.6 76.4 | Symbols: | Leucine-rich repeat (LRR) family protein | chr5:7388175-7390426 REVERSE LENGTH=452
Medicago Medtr2g086950.1 383 74.4 86.4 | protein phosphatase 1 regulatory subunit SDS22 | HC | chr2:36500777-36505526 | 20130731
Soybean Glyma12g31190.1 400 79.8 87.2  
LJGI gnl|LJGI|TC57650 1534 100.0 100.0 similar to UniRef100_A7QF71 Cluster: Chromosome undetermined scaffold_87, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_87, whole genome shotgun sequence - Vitis vinifera (Grape), partial (50%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1204560.1 length: 258 aa.
IPR001611 Leucine-rich repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS51450 LRR 5.710 42-63
64-85
86-107
108-129
130-152
176-197
199-220
224-245
IPR003591 Leucine-rich repeat, typical subtype
HMMSmart SM00369 Leucine-rich 3.7e+02 40-62
84-106
128-151
174-197
222-244
IPR025875 Leucine rich repeat 4
HMMPfam PF12799 LRR_4 1.4e-07 42-81
no_ID  
Gene3D G3DSA:3.80.10.10 no description 5.9e-25 16-135
136-254
HMMPanther PTHR10588 FAMILY 1e-115 1-258
HMMPanther PTHR10588:SF161SUBFAMILY NOT 1e-115 1-258
HMMPfam PF13855 LRR_8 1.7e-08 177-234
HMMSmart SM00365 Leucine-rich 5.5e+02 40-61
62-83
84-105
106-127
128-150
197-218
222-243
Seg seg seg NA 217-230
superfamily SSF52058 L 1.1e-40 16-256
Wolf-PSORT
Lj3g3v1204560.1	nucl 6, chlo 4, cyto 1, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1204560.1