Miyakogusa Predicted Gene
- Lj3g3v1131280.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1LTQ5_SOYBN |
438 |
96.3 |
98.2 |
(tr|I1LTQ5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G22780.1 |
416 |
91.2 |
96.8 |
| Symbols: | Adaptor protein complex AP-2, alpha subunit | chr5:7590100-7597828 REVERSE LENGTH=1013 |
| Medicago |
Medtr2g084610.1 |
432 |
95.8 |
98.1 |
| adaptor protein complex AP-2, alpha subunit | HC | chr2:35817582-35830646 | 20130731 |
| Soybean |
Glyma12g30520.1 |
438 |
96.3 |
98.2 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1131280.2 |
length: 217 aa. |
| IPR002553 |
Clathrin/coatomer adaptor, adaptin-like, N-terminal |
| method |
AccNumber |
shortName |
E-value |
location |
| Biological Process |
GO:0006886 |
intracellular protein transport |
|
|
| Biological Process |
GO:0016192 |
vesicle-mediated transport |
|
|
| Cellular Component |
GO:0030117 |
membrane coat |
|
|
| HMMPfam |
PF01602 |
Adaptin_N |
1.1e-43 |
1-211 |
| IPR011989 |
Armadillo-like helical |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
1.5e-70 |
1-216 |
| IPR016024 |
Armadillo-type fold |
| Molecular Function |
GO:0005488 |
binding |
|
|
| superfamily |
SSF48371 |
ARM |
1.2e-32 |
7-216 |
| no_ID |
|
| HMMPanther |
PTHR22780 |
ADAPTIN, |
1.6e-120 |
1-216 |
| HMMPanther |
PTHR22780:SF4 |
ADAPTER-RELATED |
1.6e-120 |
1-216 |
- Wolf-PSORT
Lj3g3v1131280.2 cyto 7.5, cyto_E.R. 4.83333, cysk 3, chlo 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1131280.2 |
|