Miyakogusa Predicted Gene

Lj3g3v1128960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LTR1_SOYBN 1847 60.5 69.8 (tr|K7LTR1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G22760.1 720 39.4 54.7 | Symbols: | PHD finger family protein | chr5:7571635-7577662 FORWARD LENGTH=1566
Medicago Medtr4g055920.1 1596 65.3 74.3 | DNA-binding and zinc-finger protein | HC | chr4:20409893-20420071 | 20130731
Soybean Glyma12g30530.1 1588 55.4 65.4  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1128960.1 length: 1724 aa.
IPR001965 Zinc finger, PHD-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00249 PHD 1.7 425-468
1181-1229
1400-1448
1676-1721
IPR004022 DDT domain
HMMPfam PF02791 DDT 1.1e-10 200-259
IPR011011 Zinc finger, FYVE/PHD-type
superfamily SSF57903 FYVE/PHD 1.4e-05 408-486
1388-1454
1669-1721
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 3.4e-08 410-471
1399-1449
IPR018500 DDT domain, subgroup
HMMSmart SM00571 domain 4e-10 199-259
IPR018501 DDT domain superfamily
ProfileScan PS50827 DDT 14.555 199-259
IPR019786 Zinc finger, PHD-type, conserved site
PatternScan PS01359 ZF_PHD_1 NA 426-467
1677-1720
IPR019787 Zinc finger, PHD-finger
Molecular Function GO:0005515 protein binding    
HMMPfam PF00628 PHD 2.7e-08 426-468
ProfileScan PS50016 ZF_PHD_2 9.873 423-470
no_ID  
HMMPanther PTHR22880 FALZ-RELATED 3e-131 179-555
HMMPanther PTHR22880:SF76 PUTATIVE 3e-131 179-555
Seg seg seg NA 2-26
71-82
109-138
146-159
743-766
1209-1220
superfamily SSF57889 Cysteine-rich 0.0077 1169-1216
Wolf-PSORT
Lj3g3v1128960.1	nucl 8, mito 4, cyto_nucl 4, nucl_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1128960.1