Miyakogusa Predicted Gene
- Lj3g3v1126810.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MS78_SOYBN |
749 |
75.3 |
83.3 |
(tr|I1MS78) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G22820.2 |
454 |
51.5 |
66.1 |
| Symbols: | ARM repeat superfamily protein | chr5:7623886-7626943 REVERSE LENGTH=534 |
| Medicago |
Medtr2g084580.1 |
729 |
72.8 |
79.4 |
| ARM repeat-like protein | HC | chr2:35781712-35788279 | 20130731 |
| Soybean |
Glyma17g05460.1 |
749 |
75.3 |
83.3 |
|
| LJGI |
gnl|LJGI|FS337169 |
1106 |
100.0 |
100.0 |
similar to UniRef100_A7PQL3 Cluster: Chromosome chr6 scaffold_25, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_25, whole genome shotgun sequence - Vitis vinifera (Grape), partial (20%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1126810.1 |
length: 505 aa. |
| IPR011989 |
Armadillo-like helical |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:1.25.10.10 |
no description |
0.00025 |
122-369 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
10-16 |
- Wolf-PSORT
Lj3g3v1126810.1 cyto 6, nucl 3, cysk 3, cysk_nucl 3, cyto_pero 3, cyto_E.R. 3, cyto_plas 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1126810.1 |
|