| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | A9P8Q5_POPTR | 191 | 100.0 | 100.0 | (tr|A9P8Q5) Histone H2B OS=Populus trichocarpa PE=2 SV=1 |
| TAIR_pep | AT1G07790.1 | 190 | 98.9 | 100.0 | | Symbols: HTB1 | Histone superfamily protein | chr1:2413049-2413495 FORWARD LENGTH=148 |
| Medicago | Medtr4g064020.1 | 191 | 100.0 | 100.0 | | core histone H2A/H2B/H3/H4 | HC | chr4:23885563-23886484 | 20130731 |
| Soybean | Glyma19g35690.1 | 189 | 98.9 | 100.0 | |
| LJGI | gnl|LJGI|TC74341 | 850 | 99.8 | 99.8 | homologue to UniRef100_A5BCC0 Cluster: Histone H2B; n=1; Vitis vinifera|Rep: Histone H2B - Vitis vinifera (Grape), partial (86%) |
| Lj3g3v1113600.1 | length: 143 aa. | |||
| IPR000558 | Histone H2B | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Cellular Component | GO:0000786 | nucleosome | ||
| Molecular Function | GO:0003677 | DNA binding | ||
| Cellular Component | GO:0005634 | nucleus | ||
| Biological Process | GO:0006334 | nucleosome assembly | ||
| FPrintScan | PR00621 | HISTONEH2B | 3.1e-49 | 56-74 75-95 97-114 114-127 127-140 |
| HMMPanther | PTHR23428 | HISTONE | 5.7e-107 | 1-143 |
| HMMSmart | SM00427 | Histone | 1.2e-73 | 46-142 |
| PatternScan | PS00357 | HISTONE_H2B | NA | 111-133 |
| IPR007125 | Histone core | |||
| Molecular Function | GO:0003677 | DNA binding | ||
| HMMPfam | PF00125 | Histone | 2.4e-23 | 52-119 |
| IPR009072 | Histone-fold | |||
| Molecular Function | GO:0046982 | protein heterodimerization activity | ||
| Gene3D | G3DSA:1.10.20.10 | no description | 1.3e-56 | 23-143 |
| superfamily | SSF47113 | Histone-fold | 9.9e-49 | 37-143 |
| no_ID | ||||
| Seg | seg | seg | NA | 6-51 |
Lj3g3v1113600.1 nucl 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v1113600.1 |