Miyakogusa Predicted Gene

Lj3g3v1101570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JCP8_MEDTR 817 58.4 74.8 (tr|G7JCP8) Tir-nbs-lrr resistance protein OS=Medicago truncatula GN=MTR_4g080330 PE=4 SV=1
TAIR_pep AT5G17680.1 537 39.7 61.1 | Symbols: | disease resistance protein (TIR-NBS-LRR class), putative | chr5:5822999-5827153 FORWARD LENGTH=1294
Medicago Medtr4g080777.1 962 65.2 79.0 | disease resistance protein (TIR-NBS-LRR class), putative | LC | chr4:31243045-31248009 | 20130731
Soybean Glyma12g15850.1 764 53.1 67.6  
LJGI gnl|LJGI|TC68060 1225 99.2 99.2 weakly similar to UniRef100_Q19PI9 Cluster: TIR-NBS-LRR type disease resistance protein; n=1; Populus trichocarpa|Rep: TIR-NBS-LRR type disease resistance protein - Populus trichocarpa (Western balsam poplar) (Populus balsamiferasubsp. trichocarpa), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1101570.1 length: 738 aa.
IPR000157 Toll/interleukin-1 receptor homology (TIR) domain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Biological Process GO:0007165 signal transduction    
HMMPfam PF01582 TIR 6.6e-34 17-149
HMMSmart SM00255 Toll 8.5e-43 14-154
ProfileScan PS50104 TIR 27.853 13-154
superfamily SSF52200 Toll/Interleukin 4.5e-43 3-157
IPR000767 Disease resistance protein
Biological Process GO:0006952 defense response    
FPrintScan PR00364 DISEASERSIST 1.9e-22 214-229
290-304
384-398
694-710
IPR001611 Leucine-rich repeat
Molecular Function GO:0005515 protein binding    
HMMPfam PF00560 LRR_1 0.52 698-723
IPR002182 NB-ARC
Molecular Function GO:0043531 ADP binding    
HMMPfam PF00931 NB-ARC 4.9e-39 198-452
IPR011713 Leucine-rich repeat 3
HMMPfam PF07725 LRR_3 2e-07 604-623
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.7e-30 173-421
no_ID  
Gene3D G3DSA:3.40.50.10140 no description 1.1e-21 13-148
Gene3D G3DSA:3.40.50.300 no description 7.8e-10 197-338
Gene3D G3DSA:3.80.10.10 no description 5.4e-18 554-738
HMMPanther PTHR11017 LEUCINE-RICH 7.1e-216 1-737
HMMPanther PTHR11017:SF130DISEASE RESISTANCE 7.1e-216 1-737
superfamily SSF46785 "Winged 1.2e-19 419-526
superfamily SSF52058 L 7.5e-32 500-738
Wolf-PSORT
Lj3g3v1101570.1	cyto 5, nucl 4, chlo 1, plas 1, vacu 1, cysk 1, golg 1, golg_plas 1, cysk_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1101570.1