Miyakogusa Predicted Gene

Lj3g3v1101550.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1J823_SOYBN 270 67.9 76.5 (tr|I1J823) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT1G32120.1 252 57.9 69.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). | chr1:11552926-11558608 FORWARD LENGTH=1206

Medicago Medtr5g027180.1 264 64.3 73.0 | transmembrane 45B-like protein | HC | chr5:11271754-11267763 | 20130731

Soybean Glyma01g35110.1 270 67.9 76.5

LJGI gnl|LJGI|TC60288 1110 98.8 98.8 similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr2 scaffold_97, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v1101550.1 length: 196 aa.

IPR006904 Protein of unknown function DUF716, TMEM45

method AccNumber shortName E-value location

HMMPanther PTHR16007 EPIDIDYMAL 9.5e-77 1-194

HMMPfam PF04819 DUF716 1.2e-41 54-188

no_ID

HMMPanther PTHR16007:SF5 SUBFAMILY 9.5e-77 1-194

Seg seg seg NA 58-76
166-181

Wolf-PSORT

Lj3g3v1101550.1 cyto 8, vacu 3, E.R. 1, cysk 1, golg 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v1101550.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1J823_SOYBN	270	67.9	76.5	(tr\|I1J823) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT1G32120.1	252	57.9	69.2	\| Symbols: \| FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Protein of unknown function DUF716 (InterPro:IPR006904); BEST Arabidopsis thaliana protein match is: Aminotransferase-like, plant mobile domain family protein (TAIR:AT1G51538.1); Has 16736 Blast hits to 9656 proteins in 576 species: Archae - 4; Bacteria - 1182; Metazoa - 7098; Fungi - 2631; Plants - 1178; Viruses - 174; Other Eukaryotes - 4469 (source: NCBI BLink). \| chr1:11552926-11558608 FORWARD LENGTH=1206
Medicago	Medtr5g027180.1	264	64.3	73.0	\| transmembrane 45B-like protein \| HC \| chr5:11271754-11267763 \| 20130731
Soybean	Glyma01g35110.1	270	67.9	76.5
LJGI	gnl\|LJGI\|TC60288	1110	98.8	98.8	similar to UniRef100_A7QHC3 Cluster: Chromosome chr2 scaffold_97, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr2 scaffold_97, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)

IPR006904	Protein of unknown function DUF716, TMEM45
Lj3g3v1101550.1				length: 196 aa.
method	AccNumber	shortName	E-value	location
HMMPanther	PTHR16007	EPIDIDYMAL	9.5e-77	1-194
HMMPfam	PF04819	DUF716	1.2e-41	54-188
no_ID
HMMPanther	PTHR16007:SF5	SUBFAMILY	9.5e-77	1-194
Seg	seg	seg	NA	58-76 166-181