Miyakogusa Predicted Gene
- Lj3g3v1089410.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7LVJ2_SOYBN |
832 |
79.5 |
87.2 |
(tr|K7LVJ2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
TAIR_pep |
AT2G28250.2 |
499 |
54.2 |
68.6 |
| Symbols: NCRK | Protein kinase superfamily protein | chr2:12044004-12046339 FORWARD LENGTH=565 |
Medicago |
Medtr2g094910.1 |
749 |
79.6 |
87.8 |
| receptor-like Serine/Threonine-kinase NCRK protein | HC | chr2:40524197-40521389 | 20130731 |
Soybean |
Glyma12g29890.1 |
788 |
82.4 |
90.4 |
|
LJGI |
gnl|LJGI|DC593913 |
119 |
86.7 |
86.7 |
similar to UniRef100_A7NZL4 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1089410.2 |
length: 509 aa. |
IPR000719 |
Protein kinase, catalytic domain |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
HMMPfam |
PF00069 |
Pkinase |
4.5e-44 |
127-400 |
ProfileScan |
PS50011 |
PROTEIN_KINASE_DOM |
36.117 |
123-405 |
IPR002290 |
Serine/threonine- / dual specificity protein kinase, catalytic domain |
Molecular Function |
GO:0004672 |
protein kinase activity |
|
|
Molecular Function |
GO:0005524 |
ATP binding |
|
|
Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
HMMSmart |
SM00220 |
Serine/Threonine |
6.4e-30 |
123-405 |
IPR008271 |
Serine/threonine-protein kinase, active site |
Molecular Function |
GO:0004674 |
protein serine/threonine kinase activity |
|
|
Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
PatternScan |
PS00108 |
PROTEIN_KINASE_ST |
NA |
248-260 |
IPR011009 |
Protein kinase-like domain |
Molecular Function |
GO:0016772 |
transferase activity, transferring phosphorus-containing groups |
|
|
superfamily |
SSF56112 |
Protein |
1.7e-73 |
93-402 |
IPR013320 |
Concanavalin A-like lectin/glucanase, subgroup |
Gene3D |
G3DSA:2.60.120.200 |
no description |
7.3e-07 |
96-136 |
IPR017441 |
Protein kinase, ATP binding site |
Molecular Function |
GO:0005524 |
ATP binding |
|
|
PatternScan |
PS00107 |
PROTEIN_KINASE_ATP |
NA |
129-151 |
IPR020635 |
Tyrosine-protein kinase, catalytic domain |
Molecular Function |
GO:0004713 |
protein tyrosine kinase activity |
|
|
Biological Process |
GO:0006468 |
protein phosphorylation |
|
|
HMMSmart |
SM00219 |
Tyrosine |
1.5e-19 |
123-402 |
no_ID |
|
Gene3D |
G3DSA:1.10.510.10 |
no description |
2.1e-40 |
191-400 |
Gene3D |
G3DSA:3.30.200.20 |
no description |
2.3e-17 |
137-190 |
HMMPanther |
PTHR24420 |
FAMILY |
1.9e-180 |
6-437 |
HMMPanther |
PTHR24420:SF132SUBFAMILY |
NOT |
1.9e-180 |
6-437 |
Seg |
seg |
seg |
NA |
13-27 |
- Wolf-PSORT
Lj3g3v1089410.2 chlo 3, nucl 2, cyto 2, mito 2, extr 2, vacu 2, cyto_nucl 2
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v1089410.2 |
|