Miyakogusa Predicted Gene

Lj3g3v1089390.3
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7M362_SOYBN 1211 83.6 89.7 (tr|K7M362) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G28260.1 1036 72.6 82.2 | Symbols: ATCNGC15, CNGC15 | cyclic nucleotide-gated channel 15 | chr2:12049989-12052453 FORWARD LENGTH=678
Medicago Medtr2g094860.1 1244 84.4 90.9 | cyclic nucleotide-gated ion channel-like protein | HC | chr2:40514457-40510033 | 20130731
Soybean Glyma12g29840.1 1210 84.3 89.3  
LJGI gnl|LJGI|FS349145 232 81.8 81.8 similar to UniRef100_A7NZL2 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (22%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1089390.3 length: 721 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
ProfileScan PS50096 IQ 6.668 637-665
IPR000595 Cyclic nucleotide-binding domain
HMMPfam PF00027 cNMP_binding 4.9e-08 523-617
HMMSmart SM00100 Cyclic 5.3e-11 501-632
ProfileScan PS50042 CNMP_BINDING_3 12.349 501-598
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 7e-06 164-173
281-291
370-387
414-423
464-471
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 2.6e-13 153-418
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 3.1e-24 499-617
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 8.5e-36 426-634
no_ID  
Gene3D G3DSA:1.10.287.630 no description 1.6e-12 424-492
Gene3D G3DSA:1.10.287.70 no description 4e-19 362-423
HMMPanther PTHR10217 VOLTAGE 1.5e-292 58-665
HMMPanther PTHR10217:SF7 CYCLIC 1.5e-292 58-665
superfamily SSF81324 Voltage-gated 6.2e-31 100-433
Wolf-PSORT
Lj3g3v1089390.3	plas 8, E.R. 4, nucl_plas 4, golg_plas 4, cysk_plas 4, mito_plas 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1089390.3