Miyakogusa Predicted Gene
- Lj3g3v1087350.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M4J4_SOYBN |
577 |
82.7 |
87.3 |
(tr|I1M4J4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G08040.2 |
511 |
72.0 |
80.2 |
| Symbols: | Protein of unknown function (DUF707) | chr1:2495507-2497973 REVERSE LENGTH=382 |
| Medicago |
Medtr2g094650.1 |
563 |
79.3 |
84.5 |
| lysine ketoglutarate reductase trans-splicing-like protein | HC | chr2:40423344-40417416 | 20130731 |
| Soybean |
Glyma13g39990.1 |
577 |
82.7 |
87.3 |
|
| LJGI |
gnl|LJGI|TC61772 |
1998 |
99.3 |
99.3 |
similar to UniRef100_A7NZK9 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v1087350.3 |
length: 343 aa. |
| IPR007877 |
Protein of unknown function DUF707 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05212 |
DUF707 |
6.8e-141 |
94-343 |
| no_ID |
|
| HMMPanther |
PTHR31210 |
FAMILY |
3.1e-199 |
1-343 |
| HMMPanther |
PTHR31210:SF0 |
SUBFAMILY |
3.1e-199 |
1-343 |
| Seg |
seg |
seg |
NA |
13-35 |
- Wolf-PSORT
Lj3g3v1087350.3 nucl 3, chlo 2, cyto 2, mito 2, vacu 2, chlo_mito 2, nucl_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v1087350.3 |
|