Miyakogusa Predicted Gene

Lj3g3v1075120.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M4J7_SOYBN 337 59.6 67.0 (tr|I1M4J7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G08010.2 144 33.6 47.9 | Symbols: GATA11 | GATA transcription factor 11 | chr1:2486202-2487402 REVERSE LENGTH=303
Medicago Medtr2g094600.1 301 56.7 65.4 | GATA type zinc finger transcription factor family protein | HC | chr2:40382738-40376743 | 20130731
Soybean Glyma13g40020.1 337 59.6 67.0  
LJGI gnl|LJGI|TC61360 1725 100.0 100.0 similar to UniRef100_A7PI38 Cluster: Chromosome chr13 scaffold_17, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_17, whole genome shotgun sequence - Vitis vinifera (Grape), partial (25%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1075120.1 length: 289 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 4.7e-16 224-257
HMMSmart SM00401 zinc 5.2e-17 218-268
PatternScan PS00344 GATA_ZN_FINGER_1 NA 224-249
ProfileScan PS50114 GATA_ZN_FINGER_2 11.503 218-254
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 8.6e-14 222-255
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 5.7e-43 196-286
HMMPanther PTHR10071:SF113ZINC FINGER 5.7e-43 196-286
Seg seg seg NA 118-133
188-201
superfamily SSF57716 Glucocorticoid 1.1e-19 218-283
Wolf-PSORT
Lj3g3v1075120.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1075120.1