Miyakogusa Predicted Gene

Lj3g3v1064910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7ME72_SOYBN 1387 84.0 91.0 (tr|K7ME72) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G57430.1 607 39.8 59.8 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:21255731-21258403 REVERSE LENGTH=890
Medicago Medtr1g111020.2 1371 82.6 90.2 | pentatricopeptide (PPR) repeat protein | HC | chr1:50134416-50129873 | 20130731
Soybean Glyma15g42850.1 1345 83.7 90.7  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1064910.1 length: 786 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0079 148-172
352-373
554-577
HMMPfam PF13041 PPR_2 1.4e-10 74-122
175-223
276-322
378-425
479-525
HMMTigr TIGR00756 PPR: 0.0023 77-111
178-212
280-309
380-413
453-481
481-514
554-577
ProfileScan PS51375 PPR 5.853 9-43
75-109
44-74
176-210
145-175
277-311
246-276
211-245
378-412
347-377
479-513
448-478
413-447
514-544
550-580
616-650
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.1e-07 347-474
no_ID  
HMMPanther PTHR24015 FAMILY 0 29-786
HMMPanther PTHR24015:SF130SUBFAMILY NOT 0 29-786
HMMPfam PF14432 DYW_deaminase 6.4e-15 659-776
Seg seg seg NA 129-144
superfamily SSF48452 TPR-like 0.0012 453-641
Wolf-PSORT
Lj3g3v1064910.1	chlo 8, cyto 3, nucl 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1064910.1