Miyakogusa Predicted Gene

Lj3g3v1061300.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M319_SOYBN 822 84.6 91.8 (tr|I1M319) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G53300.1 667 67.9 79.4 | Symbols: TTL1 | tetratricopetide-repeat thioredoxin-like 1 | chr1:19879726-19882375 FORWARD LENGTH=699
Medicago Medtr2g078020.1 845 83.9 91.8 | TPR repeat thioredoxin TTL1-like protein | HC | chr2:32334950-32330878 | 20130731
Soybean Glyma13g34610.1 822 84.6 91.8  
LJGI gnl|LJGI|TC75150 577 100.0 100.0 similar to UniRef100_A7P1Y9 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1061300.2 length: 491 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 7.2e-30 19-110
140-244
261-372
IPR012336 Thioredoxin-like fold
Gene3D G3DSA:3.40.30.10 no description 8.1e-16 392-488
superfamily SSF52833 Thioredoxin-like 4e-31 294-489
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 24.251 19-358
IPR013105 Tetratricopeptide TPR2
HMMPfam PF07719 TPR_2 0.0071 211-243
IPR013766 Thioredoxin domain
Biological Process GO:0045454 cell redox homeostasis    
HMMPfam PF00085 Thioredoxin 1.1e-12 397-486
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 14 19-52
53-86
211-244
257-290
291-324
325-358
ProfileScan PS50005 TPR 5.871 19-52
53-86
211-244
257-290
291-324
325-358
no_ID  
HMMPanther PTHR22904 TPR 1e-37 253-374
HMMPfam PF13414 TPR_11 4.7e-16 19-84
260-322
Seg seg seg NA 68-82
superfamily SSF48452 TPR-like 1.2e-27 21-360
Wolf-PSORT
Lj3g3v1061300.2	chlo 5, cyto 5, nucl 1, mito 1, plas 1, cysk 1, cysk_nucl 1, nucl_plas 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1061300.2