Miyakogusa Predicted Gene

Lj3g3v1048960.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MDV0_SOYBN 999 79.0 83.9 (tr|K7MDV0) Ubiquitin carboxyl-terminal hydrolase OS=Glycine max PE=3 SV=1
TAIR_pep AT3G14400.1 588 49.1 62.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | chr3:4811953-4815210 REVERSE LENGTH=661
Medicago Medtr2g070390.1 945 72.7 79.0 | ubiquitin carboxyl-terminal hydrolase | HC | chr2:29623011-29615218 | 20130731
Soybean Glyma15g40170.1 999 79.0 83.9  
LJGI gnl|LJGI|TC77027 827 100.0 100.0 similar to UniRef100_Q9FPS2 Cluster: Ubiquitin carboxyl-terminal hydrolase 25; n=1; Arabidopsis thaliana|Rep: Ubiquitin carboxyl-terminal hydrolase 25 - Arabidopsis thaliana (Mouse-ear cress), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1048960.1 length: 643 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 5.2e-57 22-328
ProfileScan PS50235 UCH_2_3 29.212 23-332
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 24-39
PatternScan PS00973 UCH_2_2 NA 273-291
no_ID  
Gene3D G3DSA:2.20.210.10 no description 5.4e-10 154-225
HMMPanther PTHR24006 FAMILY 1.1e-160 5-389
HMMPanther PTHR24006:SF85 SUBFAMILY 1.1e-160 5-389
Seg seg seg NA 57-67
130-150
superfamily SSF54001 Cysteine 9e-89 17-332
Wolf-PSORT
Lj3g3v1048960.1	chlo 6, nucl 3, mito 2.5, cysk_nucl 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1048960.1