| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | I1MJ28_SOYBN | 989 | 89.9 | 94.2 | (tr|I1MJ28) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT1G55490.2 | 958 | 88.8 | 93.0 | | Symbols: CPN60B, LEN1 | chaperonin 60 beta | chr1:20715717-20718673 REVERSE LENGTH=600 |
| Medicago | Medtr1g017390.1 | 993 | 90.8 | 93.9 | | TCP-1/cpn60 chaperonin family protein | HC | chr1:4833343-4839399 | 20130731 |
| Soybean | Glyma08g18760.1 | 993 | 90.3 | 94.4 | |
| LJGI | gnl|LJGI|TC64354 | 1608 | 97.7 | 97.7 | homologue to UniRef100_P08927 Cluster: RuBisCO large subunit-binding protein subunit beta, chloroplast precursor; n=1; Pisum sativum|Rep: RuBisCO large subunit-binding protein subunit beta, chloroplast precursor - Pisum sativum (Garden pea), partial (53%) |
| Lj3g3v1048870.1 | length: 596 aa. | |||
| IPR001844 | Chaperonin Cpn60 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Cellular Component | GO:0005737 | cytoplasm | ||
| Biological Process | GO:0042026 | protein refolding | ||
| FPrintScan | PR00298 | CHAPERONIN60 | 7.4e-67 | 78-104 134-161 318-341 400-425 448-469 |
| HAMAP | MF_00600 | CH60 | 36.593 | 51-596 |
| HMMTigr | TIGR02348 | GroEL: | 7e-223 | 52-579 |
| IPR002423 | Chaperonin Cpn60/TCP-1 | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| Biological Process | GO:0044267 | cellular protein metabolic process | ||
| HMMPanther | PTHR11353 | CHAPERONIN | 0 | 27-595 |
| HMMPfam | PF00118 | Cpn60_TCP1 | 2.2e-119 | 74-576 |
| superfamily | SSF48592 | GroEL | 2.7e-70 | 57-574 |
| IPR018370 | Chaperonin Cpn60, conserved site | |||
| Molecular Function | GO:0005524 | ATP binding | ||
| Cellular Component | GO:0005737 | cytoplasm | ||
| Biological Process | GO:0006457 | protein folding | ||
| PatternScan | PS00296 | CHAPERONINS_CPN60 | NA | 455-466 |
| IPR027409 | GroEL-like apical domain | |||
| Gene3D | G3DSA:3.50.7.10 | no description | 6.9e-81 | 247-420 |
| superfamily | SSF52029 | GroEL | 1.4e-76 | 242-425 |
| IPR027413 | GroEL-like equatorial domain | |||
| Gene3D | G3DSA:1.10.560.10 | no description | 9.5e-36 | 51-246 421-570 |
| no_ID | ||||
| Coil | coil | coiled-coil | NA | 389-417 |
| HMMPanther | PTHR11353:SF8 | RUBISCO | 0 | 27-595 |
| Seg | seg | seg | NA | 5-26 27-41 457-466 573-584 |
| superfamily | SSF54849 | GroEL-intermediate | 3.2e-10 | 188-241 |
Lj3g3v1048870.1 chlo 14
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj3g3v1048870.1 | Not targeted | -34.902 | 0 | -10.404 | 41.46% | -24.498 |