Miyakogusa Predicted Gene

Lj3g3v1015510.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJ12_SOYBN 1402 75.1 81.8 (tr|I1MJ12) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G17110.1 771 45.3 55.4 | Symbols: UBP15 | ubiquitin-specific protease 15 | chr1:5845816-5849889 REVERSE LENGTH=924
Medicago Medtr2g071620.2 1383 73.2 79.9 | ubiquitin carboxy-terminal hydrolase | HC | chr2:29936857-29928682 | 20130731
Soybean Glyma15g39730.3 1402 75.1 81.8  
LJGI gnl|LJGI|TC70669 690 99.7 99.7 homologue to UniRef100_A7QXG5 Cluster: Chromosome undetermined scaffold_223, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_223, whole genome shotgun sequence - Vitis vinifera (Grape), partial (4%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1015510.1 length: 940 aa.
IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
method AccNumber shortName E-value location
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
HMMPfam PF00443 UCH 1.6e-49 471-775
ProfileScan PS50235 UCH_2_3 27.097 472-779
IPR002893 Zinc finger, MYND-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF01753 zf-MYND 8.7e-10 79-116
ProfileScan PS50865 ZF_MYND_2 11.637 79-116
IPR018200 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site
Molecular Function GO:0004221 ubiquitin thiolesterase activity    
Biological Process GO:0006511 ubiquitin-dependent protein catabolic process    
PatternScan PS00972 UCH_2_1 NA 473-488
no_ID  
Gene3D G3DSA:2.20.210.10 no description 6.4e-10 599-669
HMMPanther PTHR24006 FAMILY 4e-158 471-799
HMMPanther PTHR24006:SF85 SUBFAMILY 4e-158 471-799
Seg seg seg NA 11-27
213-224
366-379
superfamily SSF144232 HIT/MYND 4e-13 69-116
superfamily SSF54001 Cysteine 5.9e-85 466-778
Wolf-PSORT
Lj3g3v1015510.1	nucl 3.5, chlo 3, extr 3, cysk_nucl 2.5, mito 1, plas 1, vacu 1, E.R. 1, E.R._vacu 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1015510.1