Miyakogusa Predicted Gene

Lj3g3v1011170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL M5X9W9_PRUPE 824 56.4 74.2 (tr|M5X9W9) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001961mg PE=4 SV=1
TAIR_pep AT4G04790.1 625 44.3 64.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:2435007-2439344 REVERSE LENGTH=821
Medicago Medtr4g081220.1 1082 65.5 78.6 | PPR containing plant-like protein | HC | chr4:31456316-31468677 | 20130731
Soybean Glyma12g34220.1 695 53.5 71.5  
LJGI gnl|LJGI|TC61609 1580 98.8 98.8 weakly similar to UniRef100_A7P0Y7 Cluster: Chromosome chr19 scaffold_4, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_4, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1011170.1 length: 837 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.093 562-581
597-624
HMMPfam PF13041 PPR_2 4.4e-09 491-537
HMMTigr TIGR00756 PPR: 7.2e-07 494-527
ProfileScan PS51375 PPR 6.106 314-348
386-420
491-525
456-490
558-590
592-626
737-771
772-806
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-116 194-788
HMMPanther PTHR24015:SF34 PENTATRICOPEPTIDE 1.8e-116 194-788
Seg seg seg NA 641-658
829-837
Wolf-PSORT
Lj3g3v1011170.1	nucl 6, chlo 3, mito 3, chlo_mito 3, cysk_nucl 3, nucl_plas 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1011170.1