Miyakogusa Predicted Gene

Lj3g3v1010970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1JXB2_SOYBN 2567 80.1 87.5 (tr|I1JXB2) Cytosine-specific methyltransferase OS=Glycine max PE=3 SV=2
TAIR_pep AT5G49160.1 1816 59.8 73.2 | Symbols: MET1, MET2, METI, DDM2, DMT01, DMT1 | methyltransferase 1 | chr5:19932501-19938186 FORWARD LENGTH=1534
Medicago Medtr6g065580.1 2544 79.4 87.1 | DNA (cytosine-5)-methyltransferase | HC | chr6:24285011-24275638 | 20130731
Soybean Glyma04g36150.1 2526 80.6 87.8  
LJGI gnl|LJGI|TC65549 1820 100.0 100.0 similar to UniRef100_O49022 Cluster: Cytosine-specific methyltransferase; n=1; Pisum sativum|Rep: Cytosine-specific methyltransferase - Pisum sativum (Garden pea), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v1010970.1 length: 1540 aa.
IPR001025 Bromo adjacent homology (BAH) domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
HMMPfam PF01426 BAH 2.4e-21 746-879
920-1058
HMMSmart SM00439 Bromo 8.7e-40 745-879
919-1058
ProfileScan PS51038 BAH 17.840 745-879
919-1058
IPR001525 C-5 cytosine methyltransferase
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
Molecular Function GO:0008168 methyltransferase activity    
FPrintScan PR00105 C5METTRFRASE 6.8e-14 1104-1120
1241-1255
1287-1300
HMMPanther PTHR10629 CYTOSINE-SPECIFIC 0 16-1537
HMMPfam PF00145 DNA_methylase 1.4e-47 1105-1531
HMMTigr TIGR00675 dcm: 3.6e-38 1106-1529
IPR017198 DNA (cytosine-5)-methyltransferase 1, eukaryote
Molecular Function GO:0003886 DNA (cytosine-5-)-methyltransferase activity    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0090116 C-5 methylation of cytosine    
HMMPIR PIRSF037404 DNA 4.7e-40 47-1540
IPR018117 DNA methylase, C-5 cytosine-specific, active site
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006306 DNA methylation    
PatternScan PS00094 C5_MTASE_1 NA 1200-1212
PatternScan PS00095 C5_MTASE_2 NA 1512-1530
IPR022702 DNA (cytosine-5)-methyltransferase 1, replication foci domain
HMMPfam PF12047 DNMT1-RFD 1.9e-47 93-227
400-553
no_ID  
Coil coil coiled-coil NA 675-696
Gene3D G3DSA:3.40.50.150 no description 1.4e-55 1196-1379
Gene3D G3DSA:3.90.120.10 no description 1.7e-05 1479-1518
HMMPanther PTHR10629:SF10 DNA 0 16-1537
Seg seg seg NA 56-67
455-469
611-622
674-694
744-757
superfamily SSF53335 S-adenosyl-L-methionine-dependent 2.6e-81 1103-1534
Wolf-PSORT
Lj3g3v1010970.1	nucl 7, chlo 2, mito 2, chlo_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v1010970.1