Miyakogusa Predicted Gene

Lj3g3v0988820.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IJ63_MEDTR 1305 68.0 75.0 (tr|G7IJ63) Translation initiation factor IF-2 OS=Medicago truncatula GN=MTR_2g064840 PE=3 SV=1
TAIR_pep AT1G17220.1 1053 63.7 73.2 | Symbols: FUG1 | Translation initiation factor 2, small GTP-binding protein | chr1:5885383-5890165 FORWARD LENGTH=1026
Medicago Medtr2g064840.1 1316 69.3 76.5 | translation initiation factor IF-2 | HC | chr2:29412952-29420822 | 20130731
Soybean Glyma08g18580.1 1289 70.0 75.9  
LJGI gnl|LJGI|TC67558 811 98.2 98.2 similar to UniRef100_P57997 Cluster: Translation initiation factor IF-2, chloroplast precursor; n=1; Phaseolus vulgaris|Rep: Translation initiation factor IF-2, chloroplast precursor - Phaseolus vulgaris (Kidney bean) (French bean), partial (12%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0988820.1 length: 1008 aa.
IPR000178 Translation initiation factor aIF-2, bacterial-like
method AccNumber shortName E-value location
Molecular Function GO:0003743 translation initiation factor activity    
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006413 translational initiation    
HMMTigr TIGR00487 IF-2: 4.5e-211 401-990
PatternScan PS01176 IF2 NA 941-963
IPR000795 Elongation factor, GTP-binding domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 3.1e-09 483-496
535-545
551-562
587-596
HMMPfam PF00009 GTP_EFTU 1.5e-38 482-645
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 1.7e-08 673-735
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 2.6e-32 481-642
IPR006847 Translation initiation factor IF-2, N-terminal
Molecular Function GO:0003743 translation initiation factor activity    
Biological Process GO:0006413 translational initiation    
HMMPfam PF04760 IF2_N 1.3e-05 401-450
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 7.6e-27 655-739
892-989
IPR015760 Translation initiation factor IF- 2
HMMPanther PTHR23115:SF41 TRANSLATION 3.4e-121 346-897
IPR023115 Translation initiation factor IF- 2, domain 3
Gene3D G3DSA:3.40.50.10050 no description 1.2e-15 791-869
HMMPfam PF11987 IF-2 4.6e-30 787-881
superfamily SSF52156 Initiation 2e-27 762-898
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.3e-54 476-674
no_ID  
Coil coil coiled-coil NA 738-759
Gene3D G3DSA:2.40.30.10 no description 2.1e-28 654-746
896-989
Gene3D G3DSA:3.40.50.300 no description 4.5e-45 476-643
HMMPanther PTHR23115 TRANSLATION 3.4e-121 346-897
Seg seg seg NA 17-45
73-94
96-106
210-215
256-274
311-323
376-388
557-567
768-786
991-1006
Wolf-PSORT
Lj3g3v0988820.1	chlo 13.5, chlo_mito 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0988820.1