Miyakogusa Predicted Gene

Lj3g3v0965980.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU50_SOYBN 990 83.8 91.2 (tr|I1KU50) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G79080.1 728 61.4 78.4 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:29747102-29748832 REVERSE LENGTH=576
Medicago Medtr2g069680.1 872 73.7 85.2 | PPR containing plant-like protein | HC | chr2:29048491-29050583 | 20130731
Soybean Glyma15g40630.1 993 83.8 91.0  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0965980.1 length: 569 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF12854 PPR_1 1.3e-10 129-159
443-472
HMMPfam PF13041 PPR_2 5.1e-12 168-215
237-285
307-348
483-529
HMMTigr TIGR00756 PPR: 1.1e-07 170-204
240-274
275-308
310-343
346-379
449-482
486-518
ProfileScan PS51375 PPR 7.081 98-132
168-202
133-167
203-237
238-272
273-307
308-342
343-377
447-481
412-446
482-516
517-551
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-06 134-402
no_ID  
HMMPanther PTHR24015 FAMILY 7e-127 79-569
HMMPanther PTHR24015:SF0 SUBFAMILY 7e-127 79-569
superfamily SSF81901 HCP-like 6e-06 89-281
Wolf-PSORT
Lj3g3v0965980.1	chlo 9.5, chlo_mito 7.33333, mito 4, cyto_mito 2.83333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0965980.1