Miyakogusa Predicted Gene

Lj3g3v0965970.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MDX1_SOYBN 1074 87.0 95.2 (tr|K7MDX1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G20230.1 506 40.5 64.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:7009570-7011852 FORWARD LENGTH=760
Medicago Medtr7g076350.1 1056 84.9 93.9 | pentatricopeptide (PPR) repeat protein | HC | chr7:28741911-28744729 | 20130731
Soybean Glyma15g40620.1 1070 87.0 95.1  
LJGI gnl|LJGI|FS354774 1108 100.0 100.0 similar to UniRef100_A2Q3P0 Cluster: Tetratricopeptide-like helical; n=1; Medicago truncatula|Rep: Tetratricopeptide-like helical - Medicago truncatula (Barrel medic), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0965970.1 length: 578 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.00054 9-35
37-67
108-133
138-168
346-369
HMMPfam PF13041 PPR_2 1.5e-12 173-217
270-318
HMMTigr TIGR00756 PPR: 0.00078 9-37
138-171
174-207
273-307
308-342
346-369
ProfileScan PS51375 PPR 7.267 35-69
4-34
136-170
105-135
70-104
171-205
271-305
240-270
306-340
342-372
408-442
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 6.8e-09 339-429
no_ID  
HMMPanther PTHR24015 FAMILY 6.7e-259 1-578
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 6.7e-259 1-578
HMMPfam PF14432 DYW_deaminase 2.4e-16 448-568
Wolf-PSORT
Lj3g3v0965970.1	cyto 7, chlo 4, cyto_plas 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0965970.1