Miyakogusa Predicted Gene

Lj3g3v0965910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU45_SOYBN 187 75.9 80.2 (tr|I1KU45) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G16610.1 160 64.3 73.9 | Symbols: SR45, RNPS1 | arginine/serine-rich 45 | chr1:5675925-5678686 REVERSE LENGTH=414
Medicago Medtr2g069490.1 179 75.0 80.2 | RNA recognition motif, a.k.a. RRM, RBD protein | HC | chr2:28910323-28904195 | 20130731
Soybean Glyma08g18310.1 187 75.9 80.2  
LJGI gnl|LJGI|TC60029 2135 99.9 99.9 similar to UniRef100_A7PWS9 Cluster: Chromosome chr19 scaffold_35, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_35, whole genome shotgun sequence - Vitis vinifera (Grape), partial (86%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0965910.1 length: 425 aa.
IPR000504 RNA recognition motif domain
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
HMMPfam PF00076 RRM_1 8.8e-15 110-178
HMMSmart SM00360 RNA 5.7e-18 107-180
ProfileScan PS50102 RRM 15.988 106-184
IPR012677 Nucleotide-binding, alpha-beta plait
Molecular Function GO:0000166 nucleotide binding    
Gene3D G3DSA:3.30.70.330 no description 2.1e-21 73-184
no_ID  
HMMPanther PTHR15481 RIBONUCLEIC 5.5e-64 6-421
HMMPanther PTHR15481:SF0 SUBFAMILY 5.5e-64 6-421
Seg seg seg NA 4-69
72-101
184-201
219-265
269-421
superfamily SSF54928 RNA-binding 1.9e-24 39-181
Wolf-PSORT
Lj3g3v0965910.1	chlo 7, nucl 5, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0965910.1