Miyakogusa Predicted Gene
- Lj3g3v0965710.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7IH36_MEDTR |
375 |
87.3 |
93.6 |
(tr|G7IH36) Mitotic spindle assembly checkpoint protein MAD2B OS=Medicago truncatula GN=MTR_2g069340 PE=4 SV=1 |
| TAIR_pep |
AT1G16590.1 |
283 |
64.6 |
82.8 |
| Symbols: REV7, ATREV7 | DNA-binding HORMA family protein | chr1:5673886-5674890 FORWARD LENGTH=215 |
| Medicago |
Medtr2g069340.1 |
375 |
87.3 |
93.6 |
| mitotic spindle assembly checkpoint MAD2B-like protein | HC | chr2:28805339-28812269 | 20130731 |
| Soybean |
Glyma15g40820.3 |
368 |
86.8 |
92.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0965710.1 |
length: 204 aa. |
| IPR003511 |
DNA-binding HORMA |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.30.900.10 |
no description |
6.4e-39 |
3-196 |
| HMMPfam |
PF02301 |
HORMA |
1.8e-16 |
12-151 |
| ProfileScan |
PS50815 |
HORMA |
33.457 |
11-194 |
| superfamily |
SSF56019 |
The |
4.7e-43 |
6-195 |
| no_ID |
|
| HMMPanther |
PTHR11842 |
MITOTIC |
1e-58 |
1-202 |
| HMMPanther |
PTHR11842:SF10 |
MITOTIC |
1e-58 |
1-202 |
- Wolf-PSORT
Lj3g3v0965710.1 extr 6, vacu 3, chlo 1, nucl 1, cyto 1, plas 1, E.R. 1, cyto_nucl 1, nucl_plas 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0965710.1 |
|