Miyakogusa Predicted Gene

Lj3g3v0965570.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KU21_SOYBN 1564 94.5 96.7 (tr|I1KU21) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G56070.1 1505 90.6 94.4 | Symbols: LOS1 | Ribosomal protein S5/Elongation factor G/III/V family protein | chr1:20968245-20971077 REVERSE LENGTH=843
Medicago Medtr2g069050.1 1563 94.4 96.6 | translation elongation factor EF-2 subunit | HC | chr2:28684491-28689296 | 20130731
Soybean Glyma08g18110.1 1564 94.5 96.7  
LJGI gnl|LJGI|TC75757 4294 97.8 97.8 homologue to UniRef100_Q9SGT4 Cluster: Elongation factor EF-2; n=1; Arabidopsis thaliana|Rep: Elongation factor EF-2 - Arabidopsis thaliana (Mouse-ear cress), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0965570.1 length: 791 aa.
IPR000640 Translation elongation factor EFG, V domain
method AccNumber shortName E-value location
Gene3D G3DSA:3.30.70.240 no description 8.8e-48 673-774
HMMPfam PF00679 EFG_C 6e-21 669-756
HMMSmart SM00838 Elongation 1.6e-19 669-758
IPR000795 Elongation factor, GTP-binding domain
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
FPrintScan PR00315 ELONGATNFCT 4.1e-07 10-18
46-56
62-73
98-107
HMMPfam PF00009 GTP_EFTU 3e-42 2-286
PatternScan PS00301 EFACTOR_GTP NA 3-18
IPR004161 Translation elongation factor EFTu/EF1A, domain 2
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03144 GTP_EFTU_D2 8.6e-12 338-413
IPR005517 Translation elongation factor EFG/EF2, domain IV
Molecular Function GO:0005525 GTP binding    
HMMPfam PF03764 EFG_IV 7.6e-37 551-667
HMMSmart SM00889 Elongation 5.1e-25 550-667
IPR009000 Translation elongation/initiation factor/Ribosomal, beta-barrel
superfamily SSF50447 Translation 8.7e-41 287-424
IPR009022 Elongation factor G, III-V domain
superfamily SSF54980 EF-G 9.1e-20 672-788
427-506
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 4.9e-67 518-672
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 3e-74 507-671
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.8e-87 1-286
no_ID  
Gene3D G3DSA:2.40.30.10 no description 2.3e-53 283-429
Gene3D G3DSA:3.30.70.870 no description 8.2e-23 431-506
Gene3D G3DSA:3.40.50.300 no description 3.5e-45 2-165
Gene3D G3DSA:3.90.1430.10 no description 4.5e-37 167-271
HMMPanther PTHR23115 TRANSLATION 0 1-786
HMMPanther PTHR23115:SF4 EUKARYOTIC 0 1-786
Seg seg seg NA 72-82
Wolf-PSORT
Lj3g3v0965570.1	nucl 5, chlo 4, cyto 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0965570.1