Miyakogusa Predicted Gene

Lj3g3v0950910.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL P93501_PHAVU 607 100.0 100.0 (tr|P93501) Ubiquitin-like protein OS=Phaseolus vulgaris PE=2 SV=1
TAIR_pep AT4G05320.6 604 100.0 100.0 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=381
Medicago Medtr4g088495.1 605 100.0 100.0 | polyubiquitin 3 | HC | chr4:35112345-35108618 | 20130731
Soybean Glyma07g32020.2 604 100.0 100.0  
LJGI gnl|LJGI|TC77422 1822 100.0 100.0 UniRef100_Q7EUR6 Cluster: AT4g05320/C17L7_240; n=8; core eudicotyledons|Rep: AT4g05320/C17L7_240 - Arabidopsis thaliana (Mouse-ear cress), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0950910.1 length: 305 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 8.5e-34 6-74
82-150
158-226
234-302
HMMSmart SM00213 Ubiquitin 3e-35 1-72
77-148
153-224
229-300
IPR019954 Ubiquitin conserved site
PatternScan PS00299 UBIQUITIN_1 NA 27-52
103-128
179-204
255-280
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 30.452 1-76
77-152
153-228
229-304
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 2.7e-38 11-31
32-52
53-74
no_ID  
Gene3D G3DSA:3.10.20.90 no description 6.3e-49 1-78
79-153
154-230
231-305
HMMPanther PTHR10666 UBIQUITIN 8.4e-288 1-305
superfamily SSF54236 Ubiquitin-like 1e-34 1-76
77-152
153-228
229-304
Wolf-PSORT
Lj3g3v0950910.1	cyto 8, cyto_nucl 7, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0950910.1