Miyakogusa Predicted Gene

Lj3g3v0950580.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JC10_MEDTR 649 85.0 89.6 (tr|G7JC10) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_3g085550 PE=3 SV=1
TAIR_pep AT1G67440.1 537 71.7 81.0 | Symbols: emb1688 | Minichromosome maintenance (MCM2/3/5) family protein | chr1:25263905-25265551 REVERSE LENGTH=433
Medicago Medtr3g085550.1 649 85.0 89.6 | ribosome biogenesis GTPase RsgA, putative | HC | chr3:38667014-38663222 | 20130731
Soybean Glyma18g01130.1 640 82.5 86.9  
LJGI gnl|LJGI|TC63028 922 100.0 100.0 similar to UniRef100_A7QP87 Cluster: Chromosome chr1 scaffold_136, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_136, whole genome shotgun sequence - Vitis vinifera (Grape), partial (30%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0950580.1 length: 374 aa.
IPR004881 Ribosome biogenesis GTPase RsgA, putative
method AccNumber shortName E-value location
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
HAMAP MF_01820 GTPase_RsgA 27.422 1-299
HMMPfam PF03193 DUF258 1.2e-53 114-293
HMMTigr TIGR00157 TIGR00157: 2.2e-33 27-169
IPR010914 EngC GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
ProfileScan PS50936 ENGC_GTPASE 38.468 63-232
IPR012340 Nucleic acid-binding, OB-fold
superfamily SSF50249 Nucleic 1.6e-08 1-54
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 6e-46 55-302
no_ID  
Gene3D G3DSA:1.10.40.50 no description 1.8e-14 238-299
Gene3D G3DSA:3.40.50.300 no description 7.6e-49 55-235
HMMPanther PTHR32120 FAMILY 1e-207 9-353
HMMPanther PTHR32120:SF1 SUBFAMILY 1e-207 9-353
Seg seg seg NA 349-363
Wolf-PSORT
Lj3g3v0950580.1	chlo 7.5, chlo_mito 5, plas 2, extr 2, mito 1.5, cyto_plas 1.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0950580.1