Miyakogusa Predicted Gene
- Lj3g3v0948330.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7I573_MEDTR |
346 |
72.9 |
81.8 |
(tr|G7I573) Receptor-like protein kinase OS=Medicago truncatula GN=MTR_1g009270 PE=4 SV=1 |
| TAIR_pep |
AT5G35390.1 |
210 |
46.8 |
63.3 |
| Symbols: | Leucine-rich repeat protein kinase family protein | chr5:13596918-13598976 FORWARD LENGTH=662 |
| Medicago |
Medtr1g009270.1 |
346 |
72.9 |
81.8 |
| LRR receptor-like kinase | HC | chr1:1253486-1256331 | 20130731 |
| Soybean |
Glyma14g18450.1 |
322 |
71.5 |
81.4 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0948330.1 |
length: 248 aa. |
| IPR013210 |
Leucine-rich repeat-containing N-terminal, type 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF08263 |
LRRNT_2 |
2.2e-06 |
30-62 |
| no_ID |
|
| Gene3D |
G3DSA:3.80.10.10 |
no description |
7.5e-30 |
30-206 |
| HMMPanther |
PTHR24420 |
FAMILY |
1e-62 |
12-227 |
| HMMPanther |
PTHR24420:SF265SUBFAMILY |
NOT |
1e-62 |
12-227 |
| HMMPfam |
PF13855 |
LRR_8 |
1.8e-10 |
115-173 |
| superfamily |
SSF52058 |
L |
3.1e-27 |
22-227 |
- Wolf-PSORT
Lj3g3v0948330.1 extr 7, vacu 3, chlo 2, nucl 1, plas 1, chlo_mito 1, nucl_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0948330.1 |
|