Miyakogusa Predicted Gene

Lj3g3v0937900.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJG2_SOYBN 892 79.4 87.2 (tr|I1MJG2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G12770.1 678 61.5 75.1 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551
Medicago Medtr2g063080.1 835 76.0 86.0 | DEAD-box ATP-dependent RNA helicase | HC | chr2:26668487-26670676 | 20130731
Soybean Glyma08g17220.1 858 77.6 85.4  
LJGI gnl|LJGI|TC66186 1469 100.0 100.0 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47; n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA helicase 47 - Arabidopsis thaliana (Mouse-ear cress), partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0937900.1 length: 561 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 1.1e-18 435-511
HMMSmart SM00490 helicase 1.4e-19 430-511
ProfileScan PS51194 HELICASE_CTER 17.296 406-550
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 2.9e-40 136-332
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 2.9e-43 131-366
ProfileScan PS51192 HELICASE_ATP_BIND_1 24.008 143-346
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.785 112-140
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.1e-53 195-534
no_ID  
Gene3D G3DSA:3.40.50.300 no description 4e-37 105-349
386-548
HMMPanther PTHR24031 FAMILY 4.1e-272 103-557
HMMPanther PTHR24031:SF114MITOCHONDRIAL DEAD 4.1e-272 103-557
Seg seg seg NA 366-377
Wolf-PSORT
Lj3g3v0937900.1	chlo 10, mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0937900.1