Miyakogusa Predicted Gene

Lj3g3v0937880.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJG2_SOYBN 739 69.5 78.7 (tr|I1MJG2) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G12770.1 540 52.4 66.6 | Symbols: ISE1, EMB1586 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:4351888-4353543 FORWARD LENGTH=551
Medicago Medtr2g063080.1 678 66.5 76.7 | DEAD-box ATP-dependent RNA helicase | HC | chr2:26668487-26670676 | 20130731
Soybean Glyma08g17220.1 721 69.1 77.7  
LJGI gnl|LJGI|FS337066 1259 99.8 99.8 similar to UniRef100_Q8W4E1 Cluster: DEAD-box ATP-dependent RNA helicase 47; n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent RNA helicase 47 - Arabidopsis thaliana (Mouse-ear cress), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0937880.1 length: 540 aa.
IPR001650 Helicase, C-terminal
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0004386 helicase activity    
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00271 Helicase_C 2.6e-20 414-490
HMMSmart SM00490 helicase 1.5e-22 409-490
ProfileScan PS51194 HELICASE_CTER 18.227 385-529
IPR011545 DNA/RNA helicase, DEAD/DEAH box type, N-terminal
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0008026 ATP-dependent helicase activity    
HMMPfam PF00270 DEAD 4.6e-33 115-311
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
HMMSmart SM00487 DEAD-like 1.4e-35 110-336
ProfileScan PS51192 HELICASE_ATP_BIND_1 21.330 122-325
IPR014014 RNA helicase, DEAD-box type, Q motif
ProfileScan PS51195 Q_MOTIF 10.449 91-119
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.7e-51 174-513
no_ID  
Gene3D G3DSA:3.40.50.300 no description 3.5e-38 78-326
365-528
HMMPanther PTHR24031 FAMILY 1.6e-234 76-534
HMMPanther PTHR24031:SF114MITOCHONDRIAL DEAD 1.6e-234 76-534
Seg seg seg NA 255-268
303-317
345-362
Wolf-PSORT
Lj3g3v0937880.1	chlo 7.5, chlo_mito 7, mito 5.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0937880.1