Miyakogusa Predicted Gene

Lj3g3v0937780.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L732_SOYBN 1187 75.3 82.6 (tr|K7L732) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT1G54350.1 877 63.4 76.6 | Symbols: | ABC transporter family protein | chr1:20286917-20290245 FORWARD LENGTH=706
Medicago Medtr2g062790.1 1235 80.6 87.8 | ABC transporter D family protein | HC | chr2:26537540-26527332 | 20130731
Soybean Glyma08g17110.1 1163 73.9 81.3  
LJGI gnl|LJGI|GO016402 1207 97.8 97.8 similar to UniRef100_A2Q3K0 Cluster: AAA ATPase; ABC transporter, transmembrane region, type 1; n=1; Medicago truncatula|Rep: AAA ATPase; ABC transporter, transmembrane region, type 1 - Medicago truncatula (Barrel medic), partial (39%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0937780.2 length: 769 aa.
IPR003439 ABC transporter-like
method AccNumber shortName E-value location
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
HMMPfam PF00005 ABC_tran 3.6e-11 512-705
ProfileScan PS50893 ABC_TRANSPORTER_2 14.706 472-769
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 6.5e-08 497-756
IPR010509 ABC transporter, N-terminal
Biological Process GO:0006810 transport    
Cellular Component GO:0016020 membrane    
HMMPfam PF06472 ABC_membrane_2 5.3e-60 105-379
IPR011527 ABC transporter, transmembrane domain, type 1
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006810 transport    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0042626 ATPase activity, coupled to transmembrane movement of substances    
Biological Process GO:0055085 transmembrane transport    
superfamily SSF90123 ABC 1.3e-25 99-426
IPR017871 ABC transporter, conserved site
Molecular Function GO:0005524 ATP binding    
Molecular Function GO:0016887 ATPase activity    
PatternScan PS00211 ABC_TRANSPORTER_1 NA 677-691
IPR017940 ABC transporter, integral membrane type 1
ProfileScan PS50929 ABC_TM1F 22.480 131-414
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2e-32 470-747
no_ID  
Gene3D G3DSA:1.20.1560.10 no description 7.2e-12 107-425
Gene3D G3DSA:3.40.50.300 no description 8.8e-34 637-740
HMMPanther PTHR11384 ATP-BINDING 3.1e-285 106-760
HMMPanther PTHR11384:SF3 ATP-BINDING 3.1e-285 106-760
Wolf-PSORT
Lj3g3v0937780.2	chlo 12, nucl 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0937780.2