Miyakogusa Predicted Gene

Lj3g3v0937760.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr3

Full length sequence(45610869 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1KTT7_SOYBN 966 85.8 88.5 (tr|I1KTT7) Uncharacterized protein OS=Glycine max PE=3 SV=1

TAIR_pep AT3G12670.1 831 74.0 82.2 | Symbols: emb2742 | CTP synthase family protein | chr3:4020351-4024086 REVERSE LENGTH=591

Medicago Medtr2g062770.1 950 84.5 87.0 | CTP synthase-like protein | HC | chr2:26517388-26524446 | 20130731

Soybean Glyma08g17120.1 966 85.8 88.5

LJGI gnl|LJGI|TC62063 1669 100.0 100.0 similar to UniRef100_A2Q3J8 Cluster: Glutamine amidotransferase, class I, active site; n=1; Medicago truncatula|Rep: Glutamine amidotransferase, class I, active site - Medicago truncatula (Barrel medic), partial (46%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj3g3v0937760.1 length: 548 aa.

IPR004468 CTP synthase

method AccNumber shortName E-value location

Molecular Function GO:0003883 CTP synthase activity

Biological Process GO:0006221 pyrimidine nucleotide biosynthetic process

HAMAP MF_01227 PyrG 45.121 1-548

HMMPanther PTHR11550 CTP 0 1-548

HMMTigr TIGR00337 PyrG: 1.2e-225 1-545

IPR017456 CTP synthase, N-terminal

Molecular Function GO:0003883 CTP synthase activity

Biological Process GO:0006221 pyrimidine nucleotide biosynthetic process

HMMPfam PF06418 CTP_synth_N 2.3e-122 1-284

IPR017926 Glutamine amidotransferase

HMMPfam PF00117 GATase 4.9e-57 309-544

ProfileScan PS51273 GATASE_TYPE_1 23.222 299-548

IPR027417 P-loop containing nucleoside triphosphate hydrolase

superfamily SSF52540 P-loop 5e-113 1-277

no_ID

Gene3D G3DSA:3.40.50.300 no description 1.7e-140 1-291

Gene3D G3DSA:3.40.50.880 no description 2.2e-101 295-547

HMMPanther PTHR11550:SF0 SUBFAMILY 0 1-548

ProfileScan PS51257 PROKAR_LIPOPROTEIN 5.000 1-30

Seg seg seg NA 4-19
56-72
314-327

superfamily SSF52317 Class 1.7e-73 295-548

Wolf-PSORT

Lj3g3v0937760.1 chlo 9, cyto 3, nucl 1, E.R. 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj3g3v0937760.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1KTT7_SOYBN	966	85.8	88.5	(tr\|I1KTT7) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep	AT3G12670.1	831	74.0	82.2	\| Symbols: emb2742 \| CTP synthase family protein \| chr3:4020351-4024086 REVERSE LENGTH=591
Medicago	Medtr2g062770.1	950	84.5	87.0	\| CTP synthase-like protein \| HC \| chr2:26517388-26524446 \| 20130731
Soybean	Glyma08g17120.1	966	85.8	88.5
LJGI	gnl\|LJGI\|TC62063	1669	100.0	100.0	similar to UniRef100_A2Q3J8 Cluster: Glutamine amidotransferase, class I, active site; n=1; Medicago truncatula\|Rep: Glutamine amidotransferase, class I, active site - Medicago truncatula (Barrel medic), partial (46%)

IPR004468	CTP synthase
Lj3g3v0937760.1				length: 548 aa.
method	AccNumber	shortName	E-value	location
Molecular Function	GO:0003883	CTP synthase activity
Biological Process	GO:0006221	pyrimidine nucleotide biosynthetic process
HAMAP	MF_01227	PyrG	45.121	1-548
HMMPanther	PTHR11550	CTP	0	1-548
HMMTigr	TIGR00337	PyrG:	1.2e-225	1-545
IPR017456	CTP synthase, N-terminal
Molecular Function	GO:0003883	CTP synthase activity
Biological Process	GO:0006221	pyrimidine nucleotide biosynthetic process
HMMPfam	PF06418	CTP_synth_N	2.3e-122	1-284
IPR017926	Glutamine amidotransferase
HMMPfam	PF00117	GATase	4.9e-57	309-544
ProfileScan	PS51273	GATASE_TYPE_1	23.222	299-548
IPR027417	P-loop containing nucleoside triphosphate hydrolase
superfamily	SSF52540	P-loop	5e-113	1-277
no_ID
Gene3D	G3DSA:3.40.50.300	no description	1.7e-140	1-291
Gene3D	G3DSA:3.40.50.880	no description	2.2e-101	295-547
HMMPanther	PTHR11550:SF0	SUBFAMILY	0	1-548
ProfileScan	PS51257	PROKAR_LIPOPROTEIN	5.000	1-30
Seg	seg	seg	NA	4-19 56-72 314-327
superfamily	SSF52317	Class	1.7e-73	295-548