Miyakogusa Predicted Gene
- Lj3g3v0936570.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
A2Q3A8_MEDTR |
742 |
75.5 |
86.3 |
(tr|A2Q3A8) Putative uncharacterized protein OS=Medicago truncatula GN=MTR_2g062430 PE=4 SV=1 |
| TAIR_pep |
AT2G44260.2 |
573 |
59.2 |
74.5 |
| Symbols: | Plant protein of unknown function (DUF946) | chr2:18295988-18297739 FORWARD LENGTH=583 |
| Medicago |
Medtr2g062430.1 |
741 |
75.5 |
86.3 |
| DUF946 family protein | HC | chr2:26354832-26357000 | 20130731 |
| Soybean |
Glyma16g17350.1 |
722 |
75.1 |
84.4 |
|
| LJGI |
gnl|LJGI|TC72947 |
2769 |
99.7 |
99.7 |
weakly similar to UniRef100_A7QR76 Cluster: Chromosome chr13 scaffold_149, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr13 scaffold_149, whole genome shotgun sequence - Vitis vinifera (Grape), partial (68%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj3g3v0936570.1 |
length: 471 aa. |
| IPR009291 |
Vacuolar protein sorting-associated protein 62 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF06101 |
DUF946 |
1.2e-225 |
1-470 |
| no_ID |
|
| HMMPanther |
PTHR17204 |
PRE-MRNA |
5.3e-212 |
1-471 |
| HMMPanther |
PTHR17204:SF7 |
PRE-MRNA |
5.3e-212 |
1-471 |
- Wolf-PSORT
Lj3g3v0936570.1 chlo 4, cyto 4, pero 3, nucl 1, vacu 1, E.R. 1, E.R._vacu 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj3g3v0936570.1 |
|