Miyakogusa Predicted Gene

Lj3g3v0931350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL Q41401_SESRO 472 69.6 78.6 (tr|Q41401) Chitinase homologue OS=Sesbania rostrata PE=2 SV=2
TAIR_pep AT5G24090.1 265 48.4 64.6 | Symbols: ATCHIA, CHIA | chitinase A | chr5:8143805-8145153 REVERSE LENGTH=302
Medicago Medtr2g040830.1 477 72.5 84.3 | chitinase | HC | chr2:17884932-17887717 | 20130731
Soybean Glyma20g30460.1 441 69.5 81.5  
LJGI gnl|LJGI|TC71131 1992 100.0 100.0 similar to UniRef100_O48642 Cluster: Class III acidic endochitinase precursor; n=1; Glycine max|Rep: Class III acidic endochitinase precursor - Glycine max (Soybean), partial (88%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0931350.1 length: 334 aa.
IPR001223 Glycoside hydrolase, family 18, catalytic domain
method AccNumber shortName E-value location
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
HMMPfam PF00704 Glyco_hydro_18 7.8e-21 32-253
IPR001579 Glycoside hydrolase, chitinase active site
Molecular Function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds    
Biological Process GO:0005975 carbohydrate metabolic process    
PatternScan PS01095 CHITINASE_18 NA 145-153
IPR013781 Glycoside hydrolase, catalytic domain
Molecular Function GO:0003824 catalytic activity    
Biological Process GO:0005975 carbohydrate metabolic process    
Gene3D G3DSA:3.20.20.80 no description 4e-94 28-307
IPR017853 Glycoside hydrolase, superfamily
superfamily SSF51445 (Trans)glycosidases 5.3e-87 26-303
no_ID  
HMMPanther PTHR31939 FAMILY 4.2e-123 2-303
HMMPanther PTHR31939:SF0 SUBFAMILY 4.2e-123 2-303
Seg seg seg NA 9-25
Wolf-PSORT
Lj3g3v0931350.1	extr 6, vacu 3, plas 2, nucl 1, cyto 1, golg 1, cyto_nucl 1, cysk_plas 1, E.R._plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0931350.1 Not targeted -16.525 -1.463 -1.457 8.83% -13.605