Miyakogusa Predicted Gene
- Lj3g3v0930320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr3
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
G7K6L7_MEDTR |
656 |
86.6 |
91.9 |
(tr|G7K6L7) DNA polymerase OS=Medicago truncatula GN=MTR_5g017060 PE=3 SV=1 |
TAIR_pep |
AT5G67100.1 |
498 |
64.9 |
79.4 |
| Symbols: ICU2 | DNA-directed DNA polymerases | chr5:26776994-26785104 FORWARD LENGTH=1524 |
Medicago |
Medtr5g017070.1 |
662 |
86.6 |
91.9 |
| DNA polymerase | HC | chr5:6204095-6191331 | 20130731 |
Soybean |
Glyma01g39430.1 |
558 |
75.2 |
81.9 |
|
LJGI |
gnl|LJGI|TC70430 |
452 |
100.0 |
100.0 |
similar to UniRef100_A7PLB6 Cluster: DNA polymerase; n=1; Vitis vinifera|Rep: DNA polymerase - Vitis vinifera (Grape), partial (5%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0930320.1 |
length: 359 aa. |
IPR006134 |
DNA-directed DNA polymerase, family B, multifunctional domain |
method |
AccNumber |
shortName |
E-value |
location |
Molecular Function |
GO:0000166 |
nucleotide binding |
|
|
Molecular Function |
GO:0003677 |
DNA binding |
|
|
Molecular Function |
GO:0003887 |
DNA-directed DNA polymerase activity |
|
|
Biological Process |
GO:0006260 |
DNA replication |
|
|
HMMPfam |
PF00136 |
DNA_pol_B |
1.4e-19 |
2-130 |
IPR015088 |
Zinc finger, DNA-directed DNA polymerase, family B, alpha |
Molecular Function |
GO:0001882 |
nucleoside binding |
|
|
Molecular Function |
GO:0003887 |
DNA-directed DNA polymerase activity |
|
|
Biological Process |
GO:0006260 |
DNA replication |
|
|
HMMPfam |
PF08996 |
zf-DNA_Pol |
1.8e-29 |
152-355 |
no_ID |
|
HMMPanther |
PTHR10322 |
DNA |
5e-96 |
1-312 |
HMMPanther |
PTHR10322:SF3 |
DNA |
5e-96 |
1-312 |
superfamily |
SSF56672 |
DNA/RNA |
2.1e-21 |
1-129 |
- Wolf-PSORT
Lj3g3v0930320.1 nucl 5.5, cyto_nucl 5, cyto 3.5, chlo 2, plas 1.5, golg_plas 1.5
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj3g3v0930320.1 |
|