Miyakogusa Predicted Gene

Lj3g3v0929270.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KTQ4_SOYBN 849 87.1 90.3 (tr|I1KTQ4) Citrate synthase OS=Glycine max PE=3 SV=1
TAIR_pep AT2G44350.1 668 68.2 80.9 | Symbols: ATCS, CSY4 | Citrate synthase family protein | chr2:18316673-18320524 FORWARD LENGTH=473
Medicago Medtr2g061630.1 844 86.0 90.7 | citrate synthase | HC | chr2:26145254-26136754 | 20130731
Soybean Glyma08g16770.2 849 87.1 90.3  
LJGI gnl|LJGI|TC57571 2771 99.5 99.5 similar to UniRef100_Q6T8H1 Cluster: Mitochondrial citrate synthase; n=2; Citrus|Rep: Mitochondrial citrate synthase - Citrus junos, partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0929270.1 length: 472 aa.
IPR002020 Citrate synthase-like
method AccNumber shortName E-value location
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
FPrintScan PR00143 CITRTSNTHASE 4.7e-51 212-225
260-275
283-311
344-364
405-421
426-440
HMMPanther PTHR11739 CITRATE 3.7e-207 19-460
HMMPfam PF00285 Citrate_synt 1.7e-101 78-456
IPR010109 Citrate synthase, eukaryotic
Molecular Function GO:0004108 citrate (Si)-synthase activity    
Biological Process GO:0044262 cellular carbohydrate metabolic process    
HMMTigr TIGR01793 cit_synth_euk: 8.3e-224 38-463
IPR016141 Citrate synthase-like, core
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
superfamily SSF48256 Citrate 1.8e-136 35-468
IPR016142 Citrate synthase-like, large alpha subdomain
Biological Process GO:0044262 cellular carbohydrate metabolic process    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
Gene3D G3DSA:1.10.580.10 no description 2.4e-115 39-358
IPR019810 Citrate synthase active site
Biological Process GO:0006099 tricarboxylic acid cycle    
Molecular Function GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer    
PatternScan PS00480 CITRATE_SYNTHASE NA 351-363
no_ID  
Coil coil coiled-coil NA 41-62
HMMPanther PTHR11739:SF0 SUBFAMILY 3.7e-207 19-460
Seg seg seg NA 5-17
293-310
Wolf-PSORT
Lj3g3v0929270.1	mito 9.5, cyto_mito 5.5, chlo 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0929270.1