Miyakogusa Predicted Gene

Lj3g3v0882650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B7FH81_MEDTR 326 70.1 77.4 (tr|B7FH81) Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G74050.1 303 65.8 75.3 | Symbols: | Ribosomal protein L6 family protein | chr1:27847256-27848680 REVERSE LENGTH=233
Medicago Medtr5g098090.1 317 68.8 75.6 | 60S ribosomal L6-like protein | HC | chr5:42942860-42945322 | 20130731
Soybean Glyma15g42620.1 325 71.1 77.2  
LJGI gnl|LJGI|TC57502 920 98.0 98.0 similar to UniRef100_A7QWX2 Cluster: 60S ribosomal protein L6; n=1; Vitis vinifera|Rep: 60S ribosomal protein L6 - Vitis vinifera (Grape), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0882650.1 length: 232 aa.
IPR000915 Ribosomal protein L6E
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR10715 60S 5.3e-134 1-232
HMMPfam PF01159 Ribosomal_L6e 2.1e-40 125-232
IPR005568 Ribosomal protein L6, N-terminal
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF03868 Ribosomal_L6e_N 1.1e-20 2-50
IPR014722 Ribosomal protein L2 domain 2
Gene3D G3DSA:2.30.30.30 no description 8.7e-32 85-172
no_ID  
Coil coil coiled-coil NA 161-182
Seg seg seg NA 70-84
162-183
Wolf-PSORT
Lj3g3v0882650.1	mito 8.5, chlo_mito 7, chlo 4.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0882650.1