Miyakogusa Predicted Gene

Lj3g3v0850590.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MJM7_SOYBN 574 65.2 75.8 (tr|I1MJM7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G08505.1 304 45.7 63.7 | Symbols: | zinc finger (CCCH-type/C3HC4-type RING finger) family protein | chr3:2580603-2582043 REVERSE LENGTH=323
Medicago Medtr3g028170.1 519 57.7 67.9 | makorin RING-zinc-finger protein | HC | chr3:8918386-8925048 | 20130731
Soybean Glyma15g42820.1 574 65.2 75.8  
LJGI gnl|LJGI|TC64363 1618 98.9 98.9 similar to UniRef100_Q7X7W8 Cluster: Makorin ring-zinc-finger protein; n=2; Pisum sativum|Rep: Makorin ring-zinc-finger protein - Pisum sativum (Garden pea), partial (27%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0850590.1 length: 452 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00014 33-53
HMMPfam PF00642 zf-CCCH 5.4e-07 34-54
HMMSmart SM00356 zinc 0.045 3-27
29-55
127-152
283-311
ProfileScan PS50103 ZF_C3H1 14.155 1-28
29-56
127-153
283-312
IPR001841 Zinc finger, RING-type
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 3e-08 192-255
HMMSmart SM00184 Ring 6.6e-06 193-253
ProfileScan PS50089 ZF_RING_2 12.106 193-254
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 6.4e-10 186-256
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 217-226
IPR026290 Putative E3 ubiquitin-protein ligase, makorin-related
HMMPanther PTHR11224 MAKORIN-RELATED 1.8e-105 6-314
no_ID  
HMMPanther PTHR11224:SF10 MAKORIN 1.8e-105 6-314
Seg seg seg NA 56-68
320-329
433-449
superfamily SSF57850 RING/U-box 7.5e-14 186-260
superfamily SSF90229 CCCH 0.013 27-55
6-26
281-317
Wolf-PSORT
Lj3g3v0850590.1	nucl 10, cyto 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0850590.1