Miyakogusa Predicted Gene

Lj3g3v0839410.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7ME80_SOYBN 1618 66.0 76.7 (tr|K7ME80) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT5G16850.1 759 38.5 54.0 | Symbols: ATTERT, TERT | telomerase reverse transcriptase | chr5:5538323-5543444 REVERSE LENGTH=1123
Medicago --No_Hits--        
Soybean Glyma15g42950.1 1473 60.9 70.5  
LJGI gnl|LJGI|TC73344 632 99.7 99.7 weakly similar to UniRef100_Q1AK04 Cluster: Telomerase reverse transcriptase; n=3; Phragmipedium longifolium|Rep: Telomerase reverse transcriptase - Phragmipedium longifolium, partial (8%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0839410.2 length: 1251 aa.
IPR000477 Reverse transcriptase
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003964 RNA-directed DNA polymerase activity    
Biological Process GO:0006278 RNA-dependent DNA replication    
HMMPfam PF00078 RVT_1 1.4e-10 807-1022
ProfileScan PS50878 RT_POL 26.382 689-1057
IPR003545 Telomere reverse transcriptase
Molecular Function GO:0003677 DNA binding    
Molecular Function GO:0003721 telomeric template RNA reverse transcriptase activity    
Cellular Component GO:0005634 nucleus    
FPrintScan PR01365 TELOMERASERT 2.3e-06 647-661
920-936
IPR021891 Telomerase ribonucleoprotein complex - RNA-binding domain
Molecular Function GO:0003964 RNA-directed DNA polymerase activity    
HMMPfam PF12009 Telomerase_RBD 1.2e-35 523-677
HMMSmart SM00975 Telomerase 1.2e-31 523-680
no_ID  
HMMPanther PTHR12066 TELOMERASE 1e-160 1-1251
HMMPanther PTHR12066:SF0 SUBFAMILY 1e-160 1-1251
Seg seg seg NA 31-42
138-149
Wolf-PSORT
Lj3g3v0839410.2	nucl 7, chlo 4, mito 2.5, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0839410.2 Not targeted -22.489 -0.240 -7.663 16.55% -14.586