Miyakogusa Predicted Gene

Lj3g3v0839400.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1N6I2_SOYBN 321 52.9 59.3 (tr|I1N6I2) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G08500.1 219 77.2 82.4 | Symbols: MYB83, AtMYB83 | myb domain protein 83 | chr3:2576958-2578072 REVERSE LENGTH=343
Medicago Medtr3g028740.1 303 51.9 57.1 | myb transcription factor | HC | chr3:9231635-9235661 | 20130731
Soybean Glyma19g05080.1 321 52.9 59.3  
LJGI gnl|LJGI|TC81472 123 80.1 80.1 homologue to UniRef100_Q2LME4 Cluster: MYB20; n=1; Malus x domestica|Rep: MYB20 - Malus domestica (Apple) (Malus sylvestris), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0839400.1 length: 352 aa.
IPR001005 SANT/Myb domain
method AccNumber shortName E-value location
Molecular Function GO:0003682 chromatin binding    
HMMPfam PF00249 Myb_DNA-binding 8.6e-14 86-130
HMMSmart SM00717 SANT 7.6e-16 32-82
85-133
IPR009057 Homeodomain-like
Molecular Function GO:0003677 DNA binding    
Gene3D G3DSA:1.10.10.60 no description 2.7e-24 25-83
84-134
superfamily SSF46689 Homeodomain-like 9.8e-26 33-132
IPR017930 Myb domain
ProfileScan PS51294 HTH_MYB 17.142 81-135
28-80
no_ID  
HMMPanther PTHR10641 MYB-LIKE 3.9e-80 28-229
HMMPanther PTHR10641:SF30 MYB 3.9e-80 28-229
Seg seg seg NA 15-25
138-154
160-171
177-202
269-299
Wolf-PSORT
Lj3g3v0839400.1	nucl 12, chlo 1, vacu 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0839400.1