Miyakogusa Predicted Gene

Lj3g3v0807650.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr3
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KYJ2_SOYBN 543 79.5 84.5 (tr|K7KYJ2) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G47420.1 459 68.5 77.7 | Symbols: | Ribosomal RNA adenine dimethylase family protein | chr2:19457574-19458777 FORWARD LENGTH=353
Medicago Medtr3g007750.1 536 79.6 83.2 | dimethyladenosine transferase | HC | chr3:1163183-1158375 | 20130731
Soybean Glyma06g47390.1 541 80.1 84.9  
LJGI gnl|LJGI|TC60705 1631 99.9 99.9 similar to UniRef100_A7Q0M3 Cluster: Chromosome chr7 scaffold_42, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr7 scaffold_42, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj3g3v0807650.1 length: 349 aa.
IPR001737 Ribosomal RNA adenine methylase transferase
method AccNumber shortName E-value location
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
HMMPanther PTHR11727 DIMETHYLADENOSINE 4.9e-118 20-349
HMMPfam PF00398 RrnaAD 3.5e-59 25-244
IPR011530 Ribosomal RNA adenine dimethylase
Biological Process GO:0006364 rRNA processing    
Molecular Function GO:0016433 rRNA (adenine) methyltransferase activity    
HAMAP MF_00607 16SrRNA_methyltr_A 40.359 23-251
HMMTigr TIGR00755 ksgA: 1.3e-75 24-255
IPR020596 Ribosomal RNA adenine methylase transferase, conserved site
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
PatternScan PS01131 RRNA_A_DIMETH NA 55-82
IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal
Biological Process GO:0000154 rRNA modification    
Molecular Function GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity    
Molecular Function GO:0008649 rRNA methyltransferase activity    
HMMSmart SM00650 Ribosomal 5.3e-87 39-208
IPR025814 18S rRNA dimethylase DIM1
Biological Process GO:0006364 rRNA processing    
Molecular Function GO:0016433 rRNA (adenine) methyltransferase activity    
ProfileScan PS51609 SAM_MT183 41.407 1-349
no_ID  
Gene3D G3DSA:3.40.50.150 no description 3.8e-67 19-209
HMMPanther PTHR11727:SF7 SUBFAMILY 4.9e-118 20-349
Seg seg seg NA 3-12
277-304
327-340
superfamily SSF53335 S-adenosyl-L-methionine-dependent 6.3e-73 16-348
Wolf-PSORT
Lj3g3v0807650.1	cyto 7, nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj3g3v0807650.1